File: hbonds.txt
Last modified: 3-oct-96

HBONDS

HBONDS commands enable you to manipulate the list of hydrogen bonds. If you want to display them, you have to bare in mind that the macro 're_image.cmds' is the place to govern presentation of hydrogen bonds on a display.

They are useful during minimization as they preserve as well as enforce (regular) hydrogen bonding patterns.

The macro is loaded using MAIN_CMDS:load_hbonds.com.

HBON_WORK

HBON_WORK calculates the list of hydrogen bonds for the "WORK_SEGM" list of segmnet IDs.

HBO_WORK

HBON_WORK calculates the list of hydrogen bonds for the "WORK_SEGM" list of segmnet IDs.

HBO_MAIN

HBO_MAIN calculates the list of hydrogen bonds for the main chain atoms of the "WORK_SEGM" list of segment IDs.

HBON_DEL

HBON_DEL deletes the hydrogen bond between the two last picked atoms.

HBON_CLEAR

HBON_INI initializes the hydrogen bond list by deleting all hydrogen bonds.