Index of /doc/cmds
Parent Directory
#calc_fofc_diff_map.cmds#
#calc_fofc_map.cmds#
#image_map_mask.cmds#
#load_nice_sel.com#
#load_utils.com#
#mini_body.cmds#
#re_phase.cmds#
#trace_chain_hybrid.cmds#
#xray_build_weight_val.cmds#
.DS_Store
.main
anal_3d_image.cmds
anal_c-omit.cmds
anal_c-omit_active.cmds
anal_c-real.cmds
anal_ener.cmds
anal_ener.cmds~
anal_graph_correl.cmds
anal_graph_rval.cmds
anal_graph_temp.cmds
anal_group.cmds
anal_image.cmds
anal_image.cmds~
anal_init.cmds
anal_kind.cmds
anal_param_angle.cmds
anal_param_bond.cmds
anal_r-omit.cmds
anal_r-real.cmds
anal_temp.cmds
anal_temp.cmds~
auto_seq.cmds
auto_seq.cmds~
auto_seq_do.cmds
auto_seq_do.cmds~
auto_stuff_between.cmds
auto_stuff_find_chain.cmds
auto_stuff_find_pept.cmds
auto_stuff_find_pept.cmds~
auto_stuff_fix_pept.cmds
auto_stuff_fix_pept.cmds~
auto_stuff_name_side.cmds
auto_stuff_path.cmds
auto_stuff_rig_main.cmds
auto_stuff_rig_resi.cmds
auto_stuff_rig_side.cmds
auto_stuff_rig_side.cmds~
auto_stuff_side.cmds
auto_stuff_side.cmds~
auto_stuff_torsion.cmds
auto_stuff_weight.cmds
auto_stuff_weight.cmds~
auto_stuff_weight_atom.cmds
between.rota
bond.rota
calc_2fofc_map.cmds
calc_2fofc_sigma_a_map.cmds
calc_2fofc_sigma_a_map.cmds~
calc_aniso_coor.cmds
calc_aniso_coor.cmds~
calc_bulk_solv_corr.cmds
calc_bulk_solv_corr.cmds~
calc_fc_map.cmds
calc_fo_map.cmds
calc_fo_map.cmds~
calc_fo_phase_fc.cmds
calc_fo_phase_fc_map.cmds
calc_fofc_diff_map.cmds
calc_fofc_diff_map.cmds~
calc_fofc_map.cmds
calc_fofc_map.cmds~
calc_kick_map.cmds
calc_kick_omit_map.cmds
calc_patt_fc_map.cmds
calc_patt_map.cmds
calc_sigma_a_map.cmds
calc_sigma_a_map.cmds~
center_define.cmds
center_define.cmds~
center_next.cmds
center_start.cmds
center_start.cmds~
chain_beg.rota
chain_end.rota
chain_med.rota
clone.cmds
copy_coor.cmds
dele_atom.cmds
dele_res.cmds
dens_comb.cmds
dihed.rota
energy_chem_off.cmds
energy_chem_on.cmds
energy_dens_ff.cmds
energy_dens_off.cmds
energy_dens_on.cmds
energy_pair_off.cmds
energy_pair_on.cmds
fix_geom_peptide.cmds
fix_geom_side.cmds
flip.cmds
gen_solvent.cmds
gen_solvent.cmds~
get_atom_file.cmds
get_pdb_protein.cmds
hbond_delete.cmds
hbond_delete.cmds~
hbond_make.cmds
hbond_make.cmds~
hbonds_calc.cmds
hbonds_calc.cmds~
hbonds_calc_main.cmds
hbonds_calc_main.cmds~
hist_match.com
image_atom_ball.cmds
image_col2_by_resi.cmds
image_col2_by_weight.cmds
image_col2_carbons.cmds
image_col2_current.cmds
image_col2_default.cmds
image_color.cmds
image_color_ask.cmds
image_color_set.cmds
image_data_rad.cmds
image_do_beg_copy.cmds
image_do_end_copy.cmds
image_do_rib_line.cmds
image_do_rib_stick.cmds
image_do_save_view.cmds
image_do_save_view.cmds~
image_gen_poin_surf.cmds
image_gen_poin_surf.cmds~
image_light_funct.cmds
image_light_mode.cmds
image_map_area.cmds
image_map_box.cmds
image_map_contour.cmds
image_map_envel.cmds
image_map_erase.cmds
image_map_lines.cmds
image_map_mask.cmds
image_map_off.cmds
image_map_on.cmds
image_map_scroll_contour.cmds
image_map_show.cmds
image_map_sticks.cmds
image_map_x-ax.cmds
image_map_y-ax.cmds
image_map_z-ax.cmds
image_use_active.cmds
image_use_by_res_name.cmds
image_use_each_ten.cmds
image_use_history.cmds
image_use_nohydrogens.cmds
image_use_work.cmds
input.cop
invert_chain.cmds
invert_chain.cmds~
kick_active.cmds
kick_add_maps.cmds
kick_rad.cmds
kick_seed.cmds
load_analysis.com
load_analysis.com~
load_auto_seq.com
load_auto_seq.com~
load_auto_stuff.com
load_auto_stuff.com~
load_build_ext.com
load_build_extend.com
load_build_extend.com~
load_center.com
load_center.com~
load_dens_mod.com
load_depp_page.com
load_depp_page.com~
load_depp_page_2.com
load_depp_page_2.com~
load_energy.com
load_energy.com~
load_fix_geom.com
load_hbonds.com
load_hbonds.com~
load_image_col.com
load_image_col2.com
load_image_data.com
load_image_data.com~
load_image_do.com
load_image_do.com~
load_image_light.com
load_image_map.com
load_image_map.com~
load_image_map_envel.com
load_image_sel.com
load_image_sel.com~
load_map_atom.com
load_map_calc.com
load_map_calc.com~
load_map_edit.com
load_map_mask.com
load_map_mask.com~
load_nice_sel.com
load_nice_sel.com~
load_refine.com
load_rename.com
load_rms_fit.com
load_secondary_dna.com
load_secondary_dna.com~
load_trace.com
load_trace.com~
load_trace_old.com
load_use.com
load_use.com~
load_utils.com
load_utils.com~
load_xray_build.com
load_xray_build.com~
mak_mask_skel_sym.cmds
make_map_active.cmds
make_map_active.cmds~
make_map_around.cmds
make_map_atom_diff.cmds
make_map_fill.cmds
make_map_from.cmds
make_map_merge.cmds
make_map_radius.cmds
make_map_scale.cmds
make_map_set.cmds
make_topology.cmds
make_topology.cmds~
map_calc_kick_stuf_field.cmds
map_mask_score_map.cmds
map_mask_skel_clean.cmds
map_mask_skel_gen.cmds
map_mask_skel_gen.cmds.save
map_mask_skel_gen.cmds~
map_mask_skel_ima.cmds
map_mask_skel_ima.cmds~
map_mask_skel_inq.cmds
map_mask_skel_sym.cmds
map_mask_skel_sym.cmds~
merge_res.cmds
mini_body.cmds
mov_rt_6.cmds
move_rotate_6.cmds
nmol_action.cmds
nmol_action.cmds~
nmol_get_other.cmds
nmol_getput_other.cmds
nmol_getput_other.cmds~
nmol_getput_other.com
nmol_getput_other.com~
nmol_goto_seq.com
nmol_put_other.cmds
nmol_work_mode.cmds
par_hem.main
phase_comb.cmds
phase_comb.cmds~
re_image.cmds
re_image.cmds~
re_image_col.cmds
re_image_set.cmds
re_phase.cmds
re_phase.cmds~
real_atom_cros_show.cmds
refine.cmds
refine_b.cmds
refine_target.cmds
rename_atom.cmds
rename_resi.cmds
rename_segm.cmds
rename_seq.cmds
rename_seq_auto.cmds
restore_file.cmds
restore_file.cmds~
rms_fit.cmds
rotate_between.com
rotate_bond.com
rotate_bonds.com
rotate_chain_beg.com
rotate_chain_end.com
rotate_chain_middle.com
save_file.cmds
save_view.cmds
save_view.cmds~
scnd_dna_2.cmds
scnd_dna_2.cmds~
second_dna_a.cmds
secondary_dna.cmds
secondary_dna.cmds~
sel_active.cmds
sel_active.cmds~
sel_active_2res_rang.cmds
sel_active_neigh.cmds
sel_active_segm.cmds
sel_active_work.cmds
sel_active_work.cmds~
sel_add_mode_off.cmds
sel_add_mode_off.cmds~
sel_add_mode_on.cmds
sel_add_mode_on.cmds~
sel_anchor.cmds
sel_fix_atoms.cmds
sel_fix_atoms.cmds~
set_side_chain_weight.cmds
set_temp.cmds
show_segm.cmds
solv_flat.cmds
symmetry.cmds
symmetry.cmds~
symmetry_ca.cmds
trace_3angl.cmds
trace_3angl.cmds.old
trace_3angl.cmds.orig
trace_3angl.cmds~
trace_NCACO.cmds
trace_NCACO.cmds~
trace_NCACO_accept.cmds
trace_NCACO_accept.cmds~
trace_atoms.cmds
trace_buid_res.cmds
trace_build_res.cmds
trace_chain.cmds
trace_chain.cmds~
trace_chain_hybrid.cmds
trace_chain_hybrid.cmds~
trace_chain_old.cmds
trace_chain_polyala.cmds
trace_chain_polyala.cmds~
trace_chain_skelet.cmds
trace_chain_skelet.cmds~
trace_chain_test.cmds
trace_chain_test.cmds~
trace_goto_jobs.cmds
trace_goto_jobs.cmds~
trace_history_to_CA.cmds
trace_map.cmds
trace_merge.cmds
trace_merge.cmds~
trace_model.cmds
trace_model.cmds~
trace_name_res.cmds
trace_origin.cmds
trace_origin.cmds~
trace_secondary.cmds
trace_secondary_back.cmds
trace_secondary_clean.cmds
trace_secondary_merge.cmds
trace_side.cmds
trace_side.cmds~
trace_symm_overlaps.cmds
trace_symm_overlaps.cmds~
trace_to_resid.cmds
un_do.cmds
update_segm.cmds
use_atoms.cmds
use_atoms.cmds~
utils_background_pdb.cmds
utils_rms_fit_1_to_2.cmds
where_is_segment.cmds
where_is_segment.cmds~
xray_build_weight_set.cmds
xray_build_weight_set.cmds~
xray_build_weight_val.cmds
xray_build_weight_val.cmds~